WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8A.3a.1 Sequence Name  Y43F8A.3a.1
Length (nt)  1325   Chromosome Location  V: 19377446-19381026
Chromosome . Primary Identifier  V Chromosome Location . Start  19377446
Chromosome Location . End  19381026 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8A.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012810 nceh-1 Y43F8A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8A.3a Y43F8A.3a 1275   V: 19377450-19377626

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8A.3a.1 19377446 19381026 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217587   181   V: 19377446-19377626 Caenorhabditis elegans
Exon217589   272   V: 19378314-19378585 Caenorhabditis elegans
Exon217590   326   V: 19379280-19379605 Caenorhabditis elegans
Exon217592   128   V: 19379746-19379873 Caenorhabditis elegans
Exon217594   240   V: 19380563-19380802 Caenorhabditis elegans
Exon217596   178   V: 19380849-19381026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8A.3a.1 19377446 19381026 1

1 Sequence

Length
1325

1 Sequence Ontology Term

Identifier Name Description
transcript