WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8A.4.1 Sequence Name  Y43F8A.4.1
Length (nt)  1110   Chromosome Location  V: 19381268-19384760
Chromosome . Primary Identifier  V Chromosome Location . Start  19381268
Chromosome Location . End  19384760 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005831 srw-84 Y43F8A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8A.4 Y43F8A.4 1110   V: 19381268-19381566

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8A.4.1 19381268 19384760 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217652   299   V: 19381268-19381566 Caenorhabditis elegans
Exon217653   279   V: 19382573-19382851 Caenorhabditis elegans
Exon217654   348   V: 19383499-19383846 Caenorhabditis elegans
Exon217655   184   V: 19384577-19384760 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8A.4.1 19381268 19384760 1

1 Sequence

Length
1110

1 Sequence Ontology Term

Identifier Name Description
transcript