WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25F9.1a.1 Sequence Name  C25F9.1a.1
Length (nt)  1155   Chromosome Location  V: 19429387-19431136
Chromosome . Primary Identifier  V Chromosome Location . Start  19429387
Chromosome Location . End  19431136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25F9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005832 srw-85 C25F9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25F9.1a C25F9.1a 948   V: 19429497-19429647

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25F9.1a.1 19429387 19431136 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217683   261   V: 19429387-19429647 Caenorhabditis elegans
Exon217685   287   V: 19429696-19429982 Caenorhabditis elegans
Exon217687   159   V: 19430029-19430187 Caenorhabditis elegans
Exon217689   169   V: 19430457-19430625 Caenorhabditis elegans
Exon217691   279   V: 19430858-19431136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25F9.1a.1 19429387 19431136 -1

1 Sequence

Length
1155

1 Sequence Ontology Term

Identifier Name Description
transcript