WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04C3.1b.2 Sequence Name  M04C3.1b.2
Length (nt)  3440   Chromosome Location  V: 19437899-19444948
Chromosome . Primary Identifier  V Chromosome Location . Start  19437899
Chromosome Location . End  19444948 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04C3.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010850 M04C3.1 M04C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04C3.1b M04C3.1b 3360   V: 19437964-19438183

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1b.2 19437899 19444948 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217759   285   V: 19437899-19438183 Caenorhabditis elegans
Exon217769   293   V: 19438230-19438522 Caenorhabditis elegans
Exon217784   404   V: 19438802-19439205 Caenorhabditis elegans
Exon217788   528   V: 19440192-19440719 Caenorhabditis elegans
Exon217796   672   V: 19441660-19442331 Caenorhabditis elegans
Exon217804   685   V: 19442951-19443635 Caenorhabditis elegans
Exon217812   178   V: 19444169-19444346 Caenorhabditis elegans
Exon217820   131   V: 19444393-19444523 Caenorhabditis elegans
Exon217828   166   V: 19444567-19444732 Caenorhabditis elegans
Exon217841   98   V: 19444851-19444948 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1b.2 19437899 19444948 -1

1 Sequence

Length
3440

1 Sequence Ontology Term

Identifier Name Description
transcript