WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04C3.1c.1 Sequence Name  M04C3.1c.1
Length (nt)  3499   Chromosome Location  V: 19437954-19444933
Chromosome . Primary Identifier  V Chromosome Location . Start  19437954
Chromosome Location . End  19444933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04C3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010850 M04C3.1 M04C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04C3.1c M04C3.1c 3489   V: 19437964-19438183

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1c.1 19437954 19444933 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217765   230   V: 19437954-19438183 Caenorhabditis elegans
Exon217770   293   V: 19438230-19438522 Caenorhabditis elegans
Exon217776   54   V: 19438577-19438630 Caenorhabditis elegans
Exon217780   88   V: 19438677-19438764 Caenorhabditis elegans
Exon217785   391   V: 19438815-19439205 Caenorhabditis elegans
Exon217789   528   V: 19440192-19440719 Caenorhabditis elegans
Exon217797   672   V: 19441660-19442331 Caenorhabditis elegans
Exon217805   685   V: 19442951-19443635 Caenorhabditis elegans
Exon217813   178   V: 19444169-19444346 Caenorhabditis elegans
Exon217821   131   V: 19444393-19444523 Caenorhabditis elegans
Exon217829   166   V: 19444567-19444732 Caenorhabditis elegans
Exon217834   83   V: 19444851-19444933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04C3.1c.1 19437954 19444933 -1

1 Sequence

Length
3499

1 Sequence Ontology Term

Identifier Name Description
transcript