WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.3e.1 Sequence Name  Y43F8B.3e.1
Length (nt)  3376   Chromosome Location  V: 19503108-19519726
Chromosome . Primary Identifier  V Chromosome Location . Start  19503108
Chromosome Location . End  19519726 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012814 Y43F8B.3 Y43F8B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.3e Y43F8B.3e 3372   V: 19503112-19503304

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.3e.1 19503108 19519726 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217880   197   V: 19503108-19503304 Caenorhabditis elegans
Exon217890   82   V: 19503754-19503835 Caenorhabditis elegans
Exon217898   107   V: 19503998-19504104 Caenorhabditis elegans
Exon217911   193   V: 19506371-19506563 Caenorhabditis elegans
Exon217919   110   V: 19507286-19507395 Caenorhabditis elegans
Exon217927   144   V: 19507691-19507834 Caenorhabditis elegans
Exon217935   688   V: 19508974-19509661 Caenorhabditis elegans
Exon217942   254   V: 19510027-19510280 Caenorhabditis elegans
Exon217961   312   V: 19513942-19514253 Caenorhabditis elegans
Exon217968   168   V: 19514355-19514522 Caenorhabditis elegans
Exon217991   138   V: 19515764-19515901 Caenorhabditis elegans
Exon217999   716   V: 19516052-19516767 Caenorhabditis elegans
Exon218007   85   V: 19516824-19516908 Caenorhabditis elegans
Exon218024   77   V: 19519080-19519156 Caenorhabditis elegans
Exon218028   105   V: 19519622-19519726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.3e.1 19503108 19519726 1

1 Sequence

Length
3376

1 Sequence Ontology Term

Identifier Name Description
transcript