WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y43F8B.3a Sequence Name  Y43F8B.3a
Length (nt)  3537   Chromosome Location  V: 19503112-19503304
Chromosome . Primary Identifier  V Chromosome Location . Start  19503112
Chromosome Location . End  19503304
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46772 Y43F8B.3, isoform a 128.5 1178 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056510
WBRNAi00019950
WBRNAi00020555
WBRNAi00089197
WBRNAi00117798

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y43F8B.3a 19503112 19503304 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012814 Y43F8B.3 Y43F8B.3 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y43F8B.3a 19503112 19503304 1
CDS:Y43F8B.3a 19503754 19503835 1
CDS:Y43F8B.3a 19503998 19504104 1
CDS:Y43F8B.3a 19505895 19506059 1
CDS:Y43F8B.3a 19506371 19506563 1
CDS:Y43F8B.3a 19507286 19507395 1
CDS:Y43F8B.3a 19507691 19507834 1
CDS:Y43F8B.3a 19508974 19509661 1
CDS:Y43F8B.3a 19510027 19510280 1
CDS:Y43F8B.3a 19513942 19514253 1
CDS:Y43F8B.3a 19514355 19514522 1
CDS:Y43F8B.3a 19515764 19515901 1
CDS:Y43F8B.3a 19516052 19516767 1
CDS:Y43F8B.3a 19516824 19516908 1
CDS:Y43F8B.3a 19519080 19519156 1
CDS:Y43F8B.3a 19519622 19519726 1

1 Sequence

Length
3537

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y43F8B.3a.1 Y43F8B.3a.1 3820   V: 19503108-19520005