WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.3d.1 Sequence Name  Y43F8B.3d.1
Length (nt)  4977   Chromosome Location  V: 19503112-19518652
Chromosome . Primary Identifier  V Chromosome Location . Start  19503112
Chromosome Location . End  19518652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012814 Y43F8B.3 Y43F8B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.3d Y43F8B.3d 4977   V: 19503112-19503304

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3d.1 19503112 19518652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217883   193   V: 19503112-19503304 Caenorhabditis elegans
Exon217889   82   V: 19503754-19503835 Caenorhabditis elegans
Exon217897   107   V: 19503998-19504104 Caenorhabditis elegans
Exon217906   165   V: 19505895-19506059 Caenorhabditis elegans
Exon217910   193   V: 19506371-19506563 Caenorhabditis elegans
Exon217918   110   V: 19507286-19507395 Caenorhabditis elegans
Exon217926   144   V: 19507691-19507834 Caenorhabditis elegans
Exon217934   688   V: 19508974-19509661 Caenorhabditis elegans
Exon217941   254   V: 19510027-19510280 Caenorhabditis elegans
Exon217960   312   V: 19513942-19514253 Caenorhabditis elegans
Exon217967   168   V: 19514355-19514522 Caenorhabditis elegans
Exon217973   150   V: 19514626-19514775 Caenorhabditis elegans
Exon217978   174   V: 19514861-19515034 Caenorhabditis elegans
Exon217983   339   V: 19515205-19515543 Caenorhabditis elegans
Exon217990   138   V: 19515764-19515901 Caenorhabditis elegans
Exon217998   716   V: 19516052-19516767 Caenorhabditis elegans
Exon218006   85   V: 19516824-19516908 Caenorhabditis elegans
Exon218012   159   V: 19517070-19517228 Caenorhabditis elegans
Exon218015   168   V: 19517276-19517443 Caenorhabditis elegans
Exon218017   450   V: 19517494-19517943 Caenorhabditis elegans
Exon218019   97   V: 19518418-19518514 Caenorhabditis elegans
Exon218020   85   V: 19518568-19518652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3d.1 19503112 19518652 1

1 Sequence

Length
4977

1 Sequence Ontology Term

Identifier Name Description
transcript