WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.3b.1 Sequence Name  Y43F8B.3b.1
Length (nt)  4446   Chromosome Location  V: 19503112-19518784
Chromosome . Primary Identifier  V Chromosome Location . Start  19503112
Chromosome Location . End  19518784 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012814 Y43F8B.3 Y43F8B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.3b Y43F8B.3b 4314   V: 19503112-19503304

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3b.1 19503112 19518784 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217884   193   V: 19503112-19503304 Caenorhabditis elegans
Exon217887   82   V: 19503754-19503835 Caenorhabditis elegans
Exon217895   107   V: 19503998-19504104 Caenorhabditis elegans
Exon217904   165   V: 19505895-19506059 Caenorhabditis elegans
Exon217908   193   V: 19506371-19506563 Caenorhabditis elegans
Exon217916   110   V: 19507286-19507395 Caenorhabditis elegans
Exon217924   144   V: 19507691-19507834 Caenorhabditis elegans
Exon217932   688   V: 19508974-19509661 Caenorhabditis elegans
Exon217939   254   V: 19510027-19510280 Caenorhabditis elegans
Exon217958   312   V: 19513942-19514253 Caenorhabditis elegans
Exon217965   168   V: 19514355-19514522 Caenorhabditis elegans
Exon217988   138   V: 19515764-19515901 Caenorhabditis elegans
Exon217996   716   V: 19516052-19516767 Caenorhabditis elegans
Exon218004   85   V: 19516824-19516908 Caenorhabditis elegans
Exon218011   159   V: 19517070-19517228 Caenorhabditis elegans
Exon218014   168   V: 19517276-19517443 Caenorhabditis elegans
Exon218016   450   V: 19517494-19517943 Caenorhabditis elegans
Exon218018   97   V: 19518418-19518514 Caenorhabditis elegans
Exon218021   217   V: 19518568-19518784 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3b.1 19503112 19518784 1

1 Sequence

Length
4446

1 Sequence Ontology Term

Identifier Name Description
transcript