WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.3g.1 Sequence Name  Y43F8B.3g.1
Length (nt)  4449   Chromosome Location  V: 19503112-19519726
Chromosome . Primary Identifier  V Chromosome Location . Start  19503112
Chromosome Location . End  19519726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012814 Y43F8B.3 Y43F8B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.3g Y43F8B.3g 4449   V: 19503112-19503304

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3g.1 19503112 19519726 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217905   193   V: 19503112-19503304 Caenorhabditis elegans
Exon217912   82   V: 19503754-19503835 Caenorhabditis elegans
Exon217920   107   V: 19503998-19504104 Caenorhabditis elegans
Exon217922   414   V: 19504840-19505253 Caenorhabditis elegans
Exon217933   193   V: 19506371-19506563 Caenorhabditis elegans
Exon217941   110   V: 19507286-19507395 Caenorhabditis elegans
Exon217949   144   V: 19507691-19507834 Caenorhabditis elegans
Exon217957   688   V: 19508974-19509661 Caenorhabditis elegans
Exon217964   254   V: 19510027-19510280 Caenorhabditis elegans
Exon217983   312   V: 19513942-19514253 Caenorhabditis elegans
Exon217990   168   V: 19514355-19514522 Caenorhabditis elegans
Exon217995   150   V: 19514626-19514775 Caenorhabditis elegans
Exon218000   174   V: 19514861-19515034 Caenorhabditis elegans
Exon218005   339   V: 19515205-19515543 Caenorhabditis elegans
Exon218013   138   V: 19515764-19515901 Caenorhabditis elegans
Exon218021   716   V: 19516052-19516767 Caenorhabditis elegans
Exon218029   85   V: 19516824-19516908 Caenorhabditis elegans
Exon218046   77   V: 19519080-19519156 Caenorhabditis elegans
Exon218049   105   V: 19519622-19519726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y43F8B.3g.1 19503112 19519726 1

1 Sequence

Length
4449

1 Sequence Ontology Term

Identifier Name Description
transcript