WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.4a.1 Sequence Name  Y43F8B.4a.1
Length (nt)  861   Chromosome Location  V: 19512365-19513652
Chromosome . Primary Identifier  V Chromosome Location . Start  19512365
Chromosome Location . End  19513652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012815 phy-4 Y43F8B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.4a Y43F8B.4a 837   V: 19512389-19512624

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.4a.1 19512365 19513652 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217949   260   V: 19512365-19512624 Caenorhabditis elegans
Exon217951   301   V: 19512816-19513116 Caenorhabditis elegans
Exon217953   158   V: 19513164-19513321 Caenorhabditis elegans
Exon217955   142   V: 19513511-19513652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.4a.1 19512365 19513652 -1

1 Sequence

Length
861

1 Sequence Ontology Term

Identifier Name Description
transcript