WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.1b.3 Sequence Name  Y43F8B.1b.3
Length (nt)  1215   Chromosome Location  V: 19534876-19544077
Chromosome . Primary Identifier  V Chromosome Location . Start  19534876
Chromosome Location . End  19544077 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.1b Y43F8B.1b 939   V: 19535111-19535155

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1b.3 19534876 19544077 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218060   280   V: 19534876-19535155 Caenorhabditis elegans
Exon218074   21   V: 19535883-19535903 Caenorhabditis elegans
Exon218082   47   V: 19535956-19536002 Caenorhabditis elegans
Exon218091   141   V: 19537043-19537183 Caenorhabditis elegans
Exon218100   100   V: 19537435-19537534 Caenorhabditis elegans
Exon218109   52   V: 19537582-19537633 Caenorhabditis elegans
Exon218118   215   V: 19538970-19539184 Caenorhabditis elegans
Exon218127   102   V: 19539241-19539342 Caenorhabditis elegans
Exon218138   123   V: 19543260-19543382 Caenorhabditis elegans
Exon218148   134   V: 19543944-19544077 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1b.3 19534876 19544077 -1

1 Sequence

Length
1215

1 Sequence Ontology Term

Identifier Name Description
transcript