WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.1b.1 Sequence Name  Y43F8B.1b.1
Length (nt)  2317   Chromosome Location  V: 19534884-19546194
Chromosome . Primary Identifier  V Chromosome Location . Start  19534884
Chromosome Location . End  19546194 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.1b Y43F8B.1b 939   V: 19535111-19535155

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1b.1 19534884 19546194 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218064   272   V: 19534884-19535155 Caenorhabditis elegans
Exon218072   21   V: 19535883-19535903 Caenorhabditis elegans
Exon218080   47   V: 19535956-19536002 Caenorhabditis elegans
Exon218089   141   V: 19537043-19537183 Caenorhabditis elegans
Exon218098   100   V: 19537435-19537534 Caenorhabditis elegans
Exon218107   52   V: 19537582-19537633 Caenorhabditis elegans
Exon218116   215   V: 19538970-19539184 Caenorhabditis elegans
Exon218125   102   V: 19539241-19539342 Caenorhabditis elegans
Exon218136   123   V: 19543260-19543382 Caenorhabditis elegans
Exon218144   132   V: 19543944-19544075 Caenorhabditis elegans
Exon218151   911   V: 19544534-19545444 Caenorhabditis elegans
Exon218157   112   V: 19545493-19545604 Caenorhabditis elegans
Exon218163   50   V: 19545654-19545703 Caenorhabditis elegans
Exon218169   39   V: 19546156-19546194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1b.1 19534884 19546194 -1

1 Sequence

Length
2317

1 Sequence Ontology Term

Identifier Name Description
transcript