WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.1b.2 Sequence Name  Y43F8B.1b.2
Length (nt)  2279   Chromosome Location  V: 19534884-19545704
Chromosome . Primary Identifier  V Chromosome Location . Start  19534884
Chromosome Location . End  19545704 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.1b Y43F8B.1b 939   V: 19535111-19535155

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1b.2 19534884 19545704 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218117   272   V: 19534884-19535155 Caenorhabditis elegans
Exon218127   21   V: 19535883-19535903 Caenorhabditis elegans
Exon218135   47   V: 19535956-19536002 Caenorhabditis elegans
Exon218144   141   V: 19537043-19537183 Caenorhabditis elegans
Exon218153   100   V: 19537435-19537534 Caenorhabditis elegans
Exon218162   52   V: 19537582-19537633 Caenorhabditis elegans
Exon218171   215   V: 19538970-19539184 Caenorhabditis elegans
Exon218180   102   V: 19539241-19539342 Caenorhabditis elegans
Exon218191   123   V: 19543260-19543382 Caenorhabditis elegans
Exon218199   132   V: 19543944-19544075 Caenorhabditis elegans
Exon218206   911   V: 19544534-19545444 Caenorhabditis elegans
Exon218212   112   V: 19545493-19545604 Caenorhabditis elegans
Exon218219   51   V: 19545654-19545704 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1b.2 19534884 19545704 -1

1 Sequence

Length
2279

1 Sequence Ontology Term

Identifier Name Description
transcript