WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0399.1b.1 Sequence Name  B0399.1b.1
Length (nt)  2479   Chromosome Location  V: 19565382-19606120
Chromosome . Primary Identifier  V Chromosome Location . Start  19565382
Chromosome Location . End  19606120 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0399.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007176 kcnl-1 B0399.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0399.1b B0399.1b 2238   V: 19565391-19565505

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1b.1 19565382 19606120 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218188   124   V: 19565382-19565505 Caenorhabditis elegans
Exon218192   118   V: 19576524-19576641 Caenorhabditis elegans
Exon218201   106   V: 19582750-19582855 Caenorhabditis elegans
Exon218207   133   V: 19585591-19585723 Caenorhabditis elegans
Exon218218   151   V: 19596443-19596593 Caenorhabditis elegans
Exon218227   61   V: 19601839-19601899 Caenorhabditis elegans
Exon218233   99   V: 19602228-19602326 Caenorhabditis elegans
Exon218239   205   V: 19602580-19602784 Caenorhabditis elegans
Exon218245   161   V: 19603804-19603964 Caenorhabditis elegans
Exon218251   158   V: 19604013-19604170 Caenorhabditis elegans
Exon218257   142   V: 19604221-19604362 Caenorhabditis elegans
Exon218263   149   V: 19604415-19604563 Caenorhabditis elegans
Exon218271   872   V: 19605249-19606120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1b.1 19565382 19606120 1

1 Sequence

Length
2479

1 Sequence Ontology Term

Identifier Name Description
transcript