WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0399.1a.1 Sequence Name  B0399.1a.1
Length (nt)  2615   Chromosome Location  V: 19565391-19606124
Chromosome . Primary Identifier  V Chromosome Location . Start  19565391
Chromosome Location . End  19606124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0399.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007176 kcnl-1 B0399.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0399.1a B0399.1a 2379   V: 19565391-19565505

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1a.1 19565391 19606124 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218189   115   V: 19565391-19565505 Caenorhabditis elegans
Exon218191   118   V: 19576524-19576641 Caenorhabditis elegans
Exon218200   106   V: 19582750-19582855 Caenorhabditis elegans
Exon218205   141   V: 19585283-19585423 Caenorhabditis elegans
Exon218206   133   V: 19585591-19585723 Caenorhabditis elegans
Exon218217   151   V: 19596443-19596593 Caenorhabditis elegans
Exon218226   61   V: 19601839-19601899 Caenorhabditis elegans
Exon218232   99   V: 19602228-19602326 Caenorhabditis elegans
Exon218238   205   V: 19602580-19602784 Caenorhabditis elegans
Exon218244   161   V: 19603804-19603964 Caenorhabditis elegans
Exon218250   158   V: 19604013-19604170 Caenorhabditis elegans
Exon218256   142   V: 19604221-19604362 Caenorhabditis elegans
Exon218262   149   V: 19604415-19604563 Caenorhabditis elegans
Exon218273   876   V: 19605249-19606124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1a.1 19565391 19606124 1

1 Sequence

Length
2615

1 Sequence Ontology Term

Identifier Name Description
transcript