WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0399.1f.1 Sequence Name  B0399.1f.1
Length (nt)  2156   Chromosome Location  V: 19582523-19605888
Chromosome . Primary Identifier  V Chromosome Location . Start  19582523
Chromosome Location . End  19605888 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0399.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007176 kcnl-1 B0399.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0399.1f B0399.1f 2088   V: 19582591-19582673

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1f.1 19582523 19605888 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218199   151   V: 19582523-19582673 Caenorhabditis elegans
Exon218202   106   V: 19582750-19582855 Caenorhabditis elegans
Exon218208   133   V: 19585591-19585723 Caenorhabditis elegans
Exon218221   151   V: 19596443-19596593 Caenorhabditis elegans
Exon218231   61   V: 19601839-19601899 Caenorhabditis elegans
Exon218237   99   V: 19602228-19602326 Caenorhabditis elegans
Exon218243   205   V: 19602580-19602784 Caenorhabditis elegans
Exon218249   161   V: 19603804-19603964 Caenorhabditis elegans
Exon218255   158   V: 19604013-19604170 Caenorhabditis elegans
Exon218261   142   V: 19604221-19604362 Caenorhabditis elegans
Exon218267   149   V: 19604415-19604563 Caenorhabditis elegans
Exon218269   640   V: 19605249-19605888 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1f.1 19582523 19605888 1

1 Sequence

Length
2156

1 Sequence Ontology Term

Identifier Name Description
transcript