WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0399.1a Sequence Name  B0399.1a
Length (nt)  2379   Chromosome Location  V: 19565391-19565505
Chromosome . Primary Identifier  V Chromosome Location . Start  19565391
Chromosome Location . End  19565505
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0399.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31869 KCNL-1, isoform a 88.5 792 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001816
WBRNAi00019968
WBRNAi00028124

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0399.1a 19565391 19565505 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007176 kcnl-1 B0399.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0399.1a 19565391 19565505 1
CDS:B0399.1a 19576524 19576641 1
CDS:B0399.1a 19582750 19582855 1
CDS:B0399.1a 19585283 19585423 1
CDS:B0399.1a 19585591 19585723 1
CDS:B0399.1a 19596443 19596593 1
CDS:B0399.1a 19601839 19601899 1
CDS:B0399.1a 19602228 19602326 1
CDS:B0399.1a 19602580 19602784 1
CDS:B0399.1a 19603804 19603964 1
CDS:B0399.1a 19604013 19604170 1
CDS:B0399.1a 19604221 19604362 1
CDS:B0399.1a 19604415 19604563 1
CDS:B0399.1a 19605249 19605888 1

1 Sequence

Length
2379

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0399.1a.1 B0399.1a.1 2615   V: 19565391-19606124