WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0399.1d.1 Sequence Name  B0399.1d.1
Length (nt)  2043   Chromosome Location  V: 19591026-19605888
Chromosome . Primary Identifier  V Chromosome Location . Start  19591026
Chromosome Location . End  19605888 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0399.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007176 kcnl-1 B0399.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0399.1d B0399.1d 2043   V: 19591026-19591302

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1d.1 19591026 19605888 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218210   277   V: 19591026-19591302 Caenorhabditis elegans
Exon218219   151   V: 19596443-19596593 Caenorhabditis elegans
Exon218229   61   V: 19601839-19601899 Caenorhabditis elegans
Exon218235   99   V: 19602228-19602326 Caenorhabditis elegans
Exon218241   205   V: 19602580-19602784 Caenorhabditis elegans
Exon218247   161   V: 19603804-19603964 Caenorhabditis elegans
Exon218253   158   V: 19604013-19604170 Caenorhabditis elegans
Exon218259   142   V: 19604221-19604362 Caenorhabditis elegans
Exon218265   149   V: 19604415-19604563 Caenorhabditis elegans
Exon218268   640   V: 19605249-19605888 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1d.1 19591026 19605888 1

1 Sequence

Length
2043

1 Sequence Ontology Term

Identifier Name Description
transcript