WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0399.1f Sequence Name  B0399.1f
Length (nt)  2088   Chromosome Location  V: 19582591-19582673
Chromosome . Primary Identifier  V Chromosome Location . Start  19582591
Chromosome Location . End  19582673
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0399.1f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40889 KCNL-1, isoform f 78.1 695 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00001816
WBRNAi00028124

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:B0399.1f 19582591 19582673 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007176 kcnl-1 B0399.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:B0399.1f 19582591 19582673 1
CDS:B0399.1f 19582750 19582855 1
CDS:B0399.1f 19585591 19585723 1
CDS:B0399.1f 19596443 19596593 1
CDS:B0399.1f 19601839 19601899 1
CDS:B0399.1f 19602228 19602326 1
CDS:B0399.1f 19602580 19602784 1
CDS:B0399.1f 19603804 19603964 1
CDS:B0399.1f 19604013 19604170 1
CDS:B0399.1f 19604221 19604362 1
CDS:B0399.1f 19604415 19604563 1
CDS:B0399.1f 19605249 19605888 1

1 Sequence

Length
2088

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0399.1f.1 B0399.1f.1 2156   V: 19582523-19605888