WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0399.1e.1 Sequence Name  B0399.1e.1
Length (nt)  2275   Chromosome Location  V: 19595204-19606117
Chromosome . Primary Identifier  V Chromosome Location . Start  19595204
Chromosome Location . End  19606117 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0399.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007176 kcnl-1 B0399.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0399.1e B0399.1e 1836   V: 19595414-19595483

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1e.1 19595204 19606117 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218268   280   V: 19595204-19595483 Caenorhabditis elegans
Exon218274   151   V: 19596443-19596593 Caenorhabditis elegans
Exon218284   61   V: 19601839-19601899 Caenorhabditis elegans
Exon218290   99   V: 19602228-19602326 Caenorhabditis elegans
Exon218296   205   V: 19602580-19602784 Caenorhabditis elegans
Exon218302   161   V: 19603804-19603964 Caenorhabditis elegans
Exon218308   158   V: 19604013-19604170 Caenorhabditis elegans
Exon218314   142   V: 19604221-19604362 Caenorhabditis elegans
Exon218320   149   V: 19604415-19604563 Caenorhabditis elegans
Exon218324   869   V: 19605249-19606117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0399.1e.1 19595204 19606117 1

1 Sequence

Length
2275

1 Sequence Ontology Term

Identifier Name Description
transcript