WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8C.20.1 Sequence Name  Y43F8C.20.1
Length (nt)  1337   Chromosome Location  V: 19609494-19612150
Chromosome . Primary Identifier  V Chromosome Location . Start  19609494
Chromosome Location . End  19612150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8C.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012840 grsp-1 Y43F8C.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8C.20 Y43F8C.20 582   V: 19610163-19610313

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.20.1 19609494 19612150 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218330   820   V: 19609494-19610313 Caenorhabditis elegans
Exon218331   90   V: 19610361-19610450 Caenorhabditis elegans
Exon218332   141   V: 19610507-19610647 Caenorhabditis elegans
Exon218333   96   V: 19610692-19610787 Caenorhabditis elegans
Exon218334   190   V: 19611961-19612150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.20.1 19609494 19612150 1

1 Sequence

Length
1337

1 Sequence Ontology Term

Identifier Name Description
transcript