WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8C.13.1 Sequence Name  Y43F8C.13.1
Length (nt)  1117   Chromosome Location  V: 19693900-19697398
Chromosome . Primary Identifier  V Chromosome Location . Start  19693900
Chromosome Location . End  19697398 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8C.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012834 Y43F8C.13 Y43F8C.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8C.13 Y43F8C.13 1017   V: 19693988-19694086

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.13.1 19693900 19697398 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218360   187   V: 19693900-19694086 Caenorhabditis elegans
Exon218361   203   V: 19694549-19694751 Caenorhabditis elegans
Exon218362   201   V: 19695196-19695396 Caenorhabditis elegans
Exon218363   122   V: 19695602-19695723 Caenorhabditis elegans
Exon218364   361   V: 19696497-19696857 Caenorhabditis elegans
Exon218365   43   V: 19697356-19697398 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.13.1 19693900 19697398 -1

1 Sequence

Length
1117

1 Sequence Ontology Term

Identifier Name Description
transcript