WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8C.14.1 Sequence Name  Y43F8C.14.1
Length (nt)  2369   Chromosome Location  V: 19697732-19705212
Chromosome . Primary Identifier  V Chromosome Location . Start  19697732
Chromosome Location . End  19705212 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8C.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012835 ani-3 Y43F8C.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8C.14 Y43F8C.14 2130   V: 19697783-19697842

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.14.1 19697732 19705212 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218366   111   V: 19697732-19697842 Caenorhabditis elegans
Exon218367   178   V: 19697901-19698078 Caenorhabditis elegans
Exon218368   313   V: 19699014-19699326 Caenorhabditis elegans
Exon218369   376   V: 19700143-19700518 Caenorhabditis elegans
Exon218370   352   V: 19701082-19701433 Caenorhabditis elegans
Exon218371   176   V: 19702045-19702220 Caenorhabditis elegans
Exon218372   85   V: 19702733-19702817 Caenorhabditis elegans
Exon218373   268   V: 19702907-19703174 Caenorhabditis elegans
Exon218374   237   V: 19703627-19703863 Caenorhabditis elegans
Exon218375   273   V: 19704940-19705212 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.14.1 19697732 19705212 1

1 Sequence

Length
2369

1 Sequence Ontology Term

Identifier Name Description
transcript