WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8C.12.1 Sequence Name  Y43F8C.12.1
Length (nt)  4910   Chromosome Location  V: 19674843-19693049
Chromosome . Primary Identifier  V Chromosome Location . Start  19674843
Chromosome Location . End  19693049 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8C.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003413 mrp-7 Y43F8C.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8C.12 Y43F8C.12 4578   V: 19674894-19674926

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.12.1 19674843 19693049 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218398   84   V: 19674843-19674926 Caenorhabditis elegans
Exon218400   285   V: 19675951-19676235 Caenorhabditis elegans
Exon218401   390   V: 19677204-19677593 Caenorhabditis elegans
Exon218402   88   V: 19678774-19678861 Caenorhabditis elegans
Exon218404   181   V: 19679044-19679224 Caenorhabditis elegans
Exon218405   178   V: 19679461-19679638 Caenorhabditis elegans
Exon218406   774   V: 19680469-19681242 Caenorhabditis elegans
Exon218407   441   V: 19682719-19683159 Caenorhabditis elegans
Exon218408   314   V: 19685149-19685462 Caenorhabditis elegans
Exon218409   904   V: 19686886-19687789 Caenorhabditis elegans
Exon218410   96   V: 19689139-19689234 Caenorhabditis elegans
Exon218411   277   V: 19689369-19689645 Caenorhabditis elegans
Exon218412   493   V: 19690742-19691234 Caenorhabditis elegans
Exon218413   405   V: 19692645-19693049 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.12.1 19674843 19693049 1

1 Sequence

Length
4910

1 Sequence Ontology Term

Identifier Name Description
transcript