WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116F11A.6.1 Sequence Name  Y116F11A.6.1
Length (nt)  560   Chromosome Location  V: 19719553-19727964
Chromosome . Primary Identifier  V Chromosome Location . Start  19719553
Chromosome Location . End  19727964 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116F11A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013819 Y116F11A.6 Y116F11A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116F11A.6 Y116F11A.6 312   V: 19727481-19727651

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11A.6.1 19719553 19727964 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218403   128   V: 19719553-19719680 Caenorhabditis elegans
Exon218409   174   V: 19727478-19727651 Caenorhabditis elegans
Exon218410   258   V: 19727707-19727964 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11A.6.1 19719553 19727964 1

1 Sequence

Length
560

1 Sequence Ontology Term

Identifier Name Description
transcript