WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116F11A.3.1 Sequence Name  Y116F11A.3.1
Length (nt)  414   Chromosome Location  V: 19729031-19729637
Chromosome . Primary Identifier  V Chromosome Location . Start  19729031
Chromosome Location . End  19729637 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116F11A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013817 Y116F11A.3 Y116F11A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116F11A.3 Y116F11A.3 360   V: 19729038-19729208

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11A.3.1 19729031 19729637 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218412   178   V: 19729031-19729208 Caenorhabditis elegans
Exon218413   236   V: 19729402-19729637 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11A.3.1 19729031 19729637 1

1 Sequence

Length
414

1 Sequence Ontology Term

Identifier Name Description
transcript