WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116F11B.8.1 Sequence Name  Y116F11B.8.1
Length (nt)  1115   Chromosome Location  V: 19857634-19860980
Chromosome . Primary Identifier  V Chromosome Location . Start  19857634
Chromosome Location . End  19860980 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116F11B.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013824 Y116F11B.8 Y116F11B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116F11B.8 Y116F11B.8 1071   V: 19857654-19857699

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11B.8.1 19857634 19860980 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218617   66   V: 19857634-19857699 Caenorhabditis elegans
Exon218618   95   V: 19857753-19857847 Caenorhabditis elegans
Exon218619   314   V: 19858586-19858899 Caenorhabditis elegans
Exon218620   425   V: 19860202-19860626 Caenorhabditis elegans
Exon218621   215   V: 19860766-19860980 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11B.8.1 19857634 19860980 1

1 Sequence

Length
1115

1 Sequence Ontology Term

Identifier Name Description
transcript