WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116F11B.13.1 Sequence Name  Y116F11B.13.1
Length (nt)  549   Chromosome Location  V: 19883216-19885854
Chromosome . Primary Identifier  V Chromosome Location . Start  19883216
Chromosome Location . End  19885854 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116F11B.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013828 Y116F11B.13 Y116F11B.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116F11B.13 Y116F11B.13 549   V: 19883216-19883276

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11B.13.1 19883216 19885854 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218665   61   V: 19883216-19883276 Caenorhabditis elegans
Exon218666   107   V: 19883346-19883452 Caenorhabditis elegans
Exon218668   296   V: 19884831-19885126 Caenorhabditis elegans
Exon218669   85   V: 19885770-19885854 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116F11B.13.1 19883216 19885854 1

1 Sequence

Length
549

1 Sequence Ontology Term

Identifier Name Description
transcript