WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y60A3A.16.1 Sequence Name  Y60A3A.16.1
Length (nt)  489   Chromosome Location  V: 19921960-19922600
Chromosome . Primary Identifier  V Chromosome Location . Start  19921960
Chromosome Location . End  19922600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y60A3A.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013364 Y60A3A.16 Y60A3A.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y60A3A.16 Y60A3A.16 429   V: 19922014-19922127

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.16.1 19921960 19922600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218753   168   V: 19921960-19922127 Caenorhabditis elegans
Exon218754   118   V: 19922173-19922290 Caenorhabditis elegans
Exon218756   203   V: 19922398-19922600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.16.1 19921960 19922600 -1

1 Sequence

Length
489

1 Sequence Ontology Term

Identifier Name Description
transcript