WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y60A3A.19c.1 Sequence Name  Y60A3A.19c.1
Length (nt)  2204   Chromosome Location  V: 19916555-19920001
Chromosome . Primary Identifier  V Chromosome Location . Start  19916555
Chromosome Location . End  19920001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y60A3A.19c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013365 Y60A3A.19 Y60A3A.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y60A3A.19c Y60A3A.19c 456   V: 19916569-19916683

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.19c.1 19916555 19920001 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218792   129   V: 19916555-19916683 Caenorhabditis elegans
Exon218797   151   V: 19916753-19916903 Caenorhabditis elegans
Exon218800   1678   V: 19917951-19919628 Caenorhabditis elegans
Exon218805   246   V: 19919756-19920001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.19c.1 19916555 19920001 1

1 Sequence

Length
2204

1 Sequence Ontology Term

Identifier Name Description
transcript