WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y60A3A.14.1 Sequence Name  Y60A3A.14.1
Length (nt)  2492   Chromosome Location  V: 19926638-19934323
Chromosome . Primary Identifier  V Chromosome Location . Start  19926638
Chromosome Location . End  19934323 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y60A3A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013362 algn-7 Y60A3A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y60A3A.14 Y60A3A.14 1245   V: 19927881-19928052

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.14.1 19926638 19934323 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218767   1415   V: 19926638-19928052 Caenorhabditis elegans
Exon218768   332   V: 19928719-19929050 Caenorhabditis elegans
Exon218769   182   V: 19930648-19930829 Caenorhabditis elegans
Exon218770   153   V: 19930944-19931096 Caenorhabditis elegans
Exon218771   277   V: 19932610-19932886 Caenorhabditis elegans
Exon218772   133   V: 19934191-19934323 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.14.1 19926638 19934323 -1

1 Sequence

Length
2492

1 Sequence Ontology Term

Identifier Name Description
transcript