WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y60A3A.9.1 Sequence Name  Y60A3A.9.1
Length (nt)  848   Chromosome Location  V: 19946740-19949093
Chromosome . Primary Identifier  V Chromosome Location . Start  19946740
Chromosome Location . End  19949093 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y60A3A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013360 tmed-4 Y60A3A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y60A3A.9 Y60A3A.9 636   V: 19946949-19947026

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.9.1 19946740 19949093 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218786   287   V: 19946740-19947026 Caenorhabditis elegans
Exon218787   168   V: 19947078-19947245 Caenorhabditis elegans
Exon218788   171   V: 19948598-19948768 Caenorhabditis elegans
Exon218789   105   V: 19948819-19948923 Caenorhabditis elegans
Exon218790   117   V: 19948977-19949093 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.9.1 19946740 19949093 -1

1 Sequence

Length
848

1 Sequence Ontology Term

Identifier Name Description
transcript