WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y60A3A.7.1 Sequence Name  Y60A3A.7.1
Length (nt)  1226   Chromosome Location  V: 19955488-19958912
Chromosome . Primary Identifier  V Chromosome Location . Start  19955488
Chromosome Location . End  19958912 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y60A3A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013358 abhd-3.1 Y60A3A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y60A3A.7 Y60A3A.7 1128   V: 19955497-19955574

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.7.1 19955488 19958912 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218849   87   V: 19955488-19955574 Caenorhabditis elegans
Exon218850   167   V: 19955620-19955786 Caenorhabditis elegans
Exon218851   330   V: 19956544-19956873 Caenorhabditis elegans
Exon218852   174   V: 19957306-19957479 Caenorhabditis elegans
Exon218853   215   V: 19958394-19958608 Caenorhabditis elegans
Exon218854   253   V: 19958660-19958912 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.7.1 19955488 19958912 1

1 Sequence

Length
1226

1 Sequence Ontology Term

Identifier Name Description
transcript