WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y60A3A.3.1 Sequence Name  Y60A3A.3.1
Length (nt)  1414   Chromosome Location  V: 19975192-19978320
Chromosome . Primary Identifier  V Chromosome Location . Start  19975192
Chromosome Location . End  19978320 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y60A3A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005398 srh-183 Y60A3A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y60A3A.3 Y60A3A.3 996   V: 19975610-19975791

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.3.1 19975192 19978320 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218831   600   V: 19975192-19975791 Caenorhabditis elegans
Exon218832   304   V: 19975850-19976153 Caenorhabditis elegans
Exon218833   185   V: 19977759-19977943 Caenorhabditis elegans
Exon218834   325   V: 19977996-19978320 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y60A3A.3.1 19975192 19978320 -1

1 Sequence

Length
1414

1 Sequence Ontology Term

Identifier Name Description
transcript