WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y113G7A.5 Sequence Name  Y113G7A.5
Length (nt)  1617   Chromosome Location  V: 20023077-20023134
Chromosome . Primary Identifier  V Chromosome Location . Start  20023077
Chromosome Location . End  20023134
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32005 LGC-55 62.1 538 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055386
WBRNAi00019889
WBRNAi00036579

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.5 20023077 20023134 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013746 lgc-55 Y113G7A.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.5 20023077 20023134 1
CDS:Y113G7A.5 20026842 20026952 1
CDS:Y113G7A.5 20027234 20027333 1
CDS:Y113G7A.5 20029004 20029181 1
CDS:Y113G7A.5 20029258 20029536 1
CDS:Y113G7A.5 20030401 20030532 1
CDS:Y113G7A.5 20031557 20031757 1
CDS:Y113G7A.5 20032866 20032978 1
CDS:Y113G7A.5 20033109 20033202 1
CDS:Y113G7A.5 20033884 20034048 1
CDS:Y113G7A.5 20035219 20035319 1
CDS:Y113G7A.5 20036476 20036560 1

1 Sequence

Length
1617

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y113G7A.5.1 Y113G7A.5.1 1745   V: 20023046-20036657