WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7A.1.1 Sequence Name  Y113G7A.1.1
Length (nt)  1039   Chromosome Location  V: 20049365-20052609
Chromosome . Primary Identifier  V Chromosome Location . Start  20049365
Chromosome Location . End  20052609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005440 srh-233 Y113G7A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7A.1 Y113G7A.1 978   V: 20049382-20049688

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7A.1.1 20049365 20052609 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218909   324   V: 20049365-20049688 Caenorhabditis elegans
Exon218910   185   V: 20050708-20050892 Caenorhabditis elegans
Exon218911   231   V: 20051127-20051357 Caenorhabditis elegans
Exon218912   299   V: 20052311-20052609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7A.1.1 20049365 20052609 1

1 Sequence

Length
1039

1 Sequence Ontology Term

Identifier Name Description
transcript