WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19B2.6.1 Sequence Name  F19B2.6.1
Length (nt)  2574   Chromosome Location  V: 20158523-20161647
Chromosome . Primary Identifier  V Chromosome Location . Start  20158523
Chromosome Location . End  20161647 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19B2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008945 F19B2.6 F19B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19B2.6 F19B2.6 2424   V: 20158526-20159053

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19B2.6.1 20158523 20161647 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219118   531   V: 20158523-20159053 Caenorhabditis elegans
Exon219119   579   V: 20159139-20159717 Caenorhabditis elegans
Exon219120   240   V: 20159803-20160042 Caenorhabditis elegans
Exon219121   136   V: 20160189-20160324 Caenorhabditis elegans
Exon219122   99   V: 20160373-20160471 Caenorhabditis elegans
Exon219123   74   V: 20160514-20160587 Caenorhabditis elegans
Exon219124   441   V: 20160636-20161076 Caenorhabditis elegans
Exon219125   108   V: 20161125-20161232 Caenorhabditis elegans
Exon219126   366   V: 20161282-20161647 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19B2.6.1 20158523 20161647 1

1 Sequence

Length
2574

1 Sequence Ontology Term

Identifier Name Description
transcript