WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7B.3.1 Sequence Name  Y113G7B.3.1
Length (nt)  1043   Chromosome Location  V: 20190535-20192152
Chromosome . Primary Identifier  V Chromosome Location . Start  20190535
Chromosome Location . End  20192152 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013755 fbxa-115 Y113G7B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.3 Y113G7B.3 960   V: 20190584-20190793

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.3.1 20190535 20192152 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219118   259   V: 20190535-20190793 Caenorhabditis elegans
Exon219119   631   V: 20190840-20191470 Caenorhabditis elegans
Exon219120   78   V: 20191520-20191597 Caenorhabditis elegans
Exon219121   75   V: 20192078-20192152 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.3.1 20190535 20192152 -1

1 Sequence

Length
1043

1 Sequence Ontology Term

Identifier Name Description
transcript