WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y113G7B.5a Sequence Name  Y113G7B.5a
Length (nt)  939   Chromosome Location  V: 20199294-20199334
Chromosome . Primary Identifier  V Chromosome Location . Start  20199294
Chromosome Location . End  20199334
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23287 FOG-2, isoform a 35.8 312 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001660
WBRNAi00055407
WBRNAi00092185
WBRNAi00036593
WBRNAi00062416

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y113G7B.5a 20199294 20199334 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001482 fog-2 Y113G7B.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y113G7B.5a 20199294 20199334 1
CDS:Y113G7B.5a 20199466 20199543 1
CDS:Y113G7B.5a 20199591 20200230 1
CDS:Y113G7B.5a 20200281 20200437 1
CDS:Y113G7B.5a 20200483 20200505 1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y113G7B.5a.1 Y113G7B.5a.1 1122   V: 20199254-20200648