WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7B.2.2 Sequence Name  Y113G7B.2.2
Length (nt)  1165   Chromosome Location  V: 20193384-20195336
Chromosome . Primary Identifier  V Chromosome Location . Start  20193384
Chromosome Location . End  20195336 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005427 srh-217 Y113G7B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.2 Y113G7B.2 996   V: 20193463-20193720

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.2.2 20193384 20195336 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219182   337   V: 20193384-20193720 Caenorhabditis elegans
Exon219184   410   V: 20193769-20194178 Caenorhabditis elegans
Exon219186   418   V: 20194919-20195336 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.2.2 20193384 20195336 -1

1 Sequence

Length
1165

1 Sequence Ontology Term

Identifier Name Description
transcript