WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7B.23a.1 Sequence Name  Y113G7B.23a.1
Length (nt)  3069   Chromosome Location  V: 20239182-20249482
Chromosome . Primary Identifier  V Chromosome Location . Start  20239182
Chromosome Location . End  20249482 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.23a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004203 swsn-1 Y113G7B.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.23a Y113G7B.23a 2370   V: 20239859-20240007

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.23a.1 20239182 20249482 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219193   826   V: 20239182-20240007 Caenorhabditis elegans
Exon219201   966   V: 20241260-20242225 Caenorhabditis elegans
Exon219212   421   V: 20244238-20244658 Caenorhabditis elegans
Exon219219   93   V: 20246040-20246132 Caenorhabditis elegans
Exon219226   626   V: 20247124-20247749 Caenorhabditis elegans
Exon219228   137   V: 20249346-20249482 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.23a.1 20239182 20249482 -1

1 Sequence

Length
3069

1 Sequence Ontology Term

Identifier Name Description
transcript