WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7B.23e.1 Sequence Name  Y113G7B.23e.1
Length (nt)  4009   Chromosome Location  V: 20239239-20249488
Chromosome . Primary Identifier  V Chromosome Location . Start  20239239
Chromosome Location . End  20249488 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.23e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004203 swsn-1 Y113G7B.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.23e Y113G7B.23e 1560   V: 20239859-20240007

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.23e.1 20239239 20249488 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219194   769   V: 20239239-20240007 Caenorhabditis elegans
Exon219205   966   V: 20241260-20242225 Caenorhabditis elegans
Exon219216   421   V: 20244238-20244658 Caenorhabditis elegans
Exon219223   1710   V: 20246040-20247749 Caenorhabditis elegans
Exon219230   143   V: 20249346-20249488 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.23e.1 20239239 20249488 -1

1 Sequence

Length
4009

1 Sequence Ontology Term

Identifier Name Description
transcript