WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7B.18b.2 Sequence Name  Y113G7B.18b.2
Length (nt)  2225   Chromosome Location  V: 20250814-20267247
Chromosome . Primary Identifier  V Chromosome Location . Start  20250814
Chromosome Location . End  20267247 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.18b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007017 mdt-17 Y113G7B.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.18b Y113G7B.18b 2004   V: 20251969-20252304

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.18b.2 20250814 20267247 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219234   188   V: 20250814-20251001 Caenorhabditis elegans
Exon219236   351   V: 20251954-20252304 Caenorhabditis elegans
Exon219240   130   V: 20254872-20255001 Caenorhabditis elegans
Exon219244   218   V: 20256308-20256525 Caenorhabditis elegans
Exon219248   294   V: 20257335-20257628 Caenorhabditis elegans
Exon219252   385   V: 20262496-20262880 Caenorhabditis elegans
Exon219256   282   V: 20264523-20264804 Caenorhabditis elegans
Exon219260   80   V: 20266292-20266371 Caenorhabditis elegans
Exon219264   297   V: 20266951-20267247 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.18b.2 20250814 20267247 -1

1 Sequence

Length
2225

1 Sequence Ontology Term

Identifier Name Description
transcript