WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7B.16.1 Sequence Name  Y113G7B.16.1
Length (nt)  1587   Chromosome Location  V: 20270107-20275695
Chromosome . Primary Identifier  V Chromosome Location . Start  20270107
Chromosome Location . End  20275695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013765 cdkr-3 Y113G7B.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7B.16 Y113G7B.16 1470   V: 20270117-20270162

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.16.1 20270107 20275695 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219273   56   V: 20270107-20270162 Caenorhabditis elegans
Exon219274   132   V: 20270214-20270345 Caenorhabditis elegans
Exon219275   1036   V: 20271854-20272889 Caenorhabditis elegans
Exon219276   363   V: 20275333-20275695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7B.16.1 20270107 20275695 1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript