WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y113G7C.1.1 Sequence Name  Y113G7C.1.1
Length (nt)  4646   Chromosome Location  V: 20317742-20324032
Chromosome . Primary Identifier  V Chromosome Location . Start  20317742
Chromosome Location . End  20324032 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7C.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013771 Y113G7C.1 Y113G7C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y113G7C.1 Y113G7C.1 4485   V: 20317837-20317864

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7C.1.1 20317742 20324032 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219372   123   V: 20317742-20317864 Caenorhabditis elegans
Exon219373   78   V: 20317914-20317991 Caenorhabditis elegans
Exon219374   183   V: 20318043-20318225 Caenorhabditis elegans
Exon219375   96   V: 20318338-20318433 Caenorhabditis elegans
Exon219376   123   V: 20318482-20318604 Caenorhabditis elegans
Exon219377   2449   V: 20319629-20322077 Caenorhabditis elegans
Exon219378   639   V: 20322125-20322763 Caenorhabditis elegans
Exon219379   360   V: 20322813-20323172 Caenorhabditis elegans
Exon219380   118   V: 20323216-20323333 Caenorhabditis elegans
Exon219381   477   V: 20323556-20324032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y113G7C.1.1 20317742 20324032 1

1 Sequence

Length
4646

1 Sequence Ontology Term

Identifier Name Description
transcript