WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E2.7a.1 Sequence Name  K02E2.7a.1
Length (nt)  1173   Chromosome Location  V: 20384730-20387042
Chromosome . Primary Identifier  V Chromosome Location . Start  20384730
Chromosome Location . End  20387042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E2.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010508 K02E2.7 K02E2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E2.7a K02E2.7a 1065   V: 20384769-20385079

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E2.7a.1 20384730 20387042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219418   350   V: 20384730-20385079 Caenorhabditis elegans
Exon219422   81   V: 20385123-20385203 Caenorhabditis elegans
Exon219428   219   V: 20385254-20385472 Caenorhabditis elegans
Exon219430   52   V: 20385568-20385619 Caenorhabditis elegans
Exon219434   117   V: 20385674-20385790 Caenorhabditis elegans
Exon219440   135   V: 20386599-20386733 Caenorhabditis elegans
Exon219442   84   V: 20386779-20386862 Caenorhabditis elegans
Exon219445   135   V: 20386908-20387042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E2.7a.1 20384730 20387042 -1

1 Sequence

Length
1173

1 Sequence Ontology Term

Identifier Name Description
transcript