WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53H2.1a Sequence Name  F53H2.1a
Length (nt)  2805   Chromosome Location  V: 20387715-20387780
Chromosome . Primary Identifier  V Chromosome Location . Start  20387715
Chromosome Location . End  20387780
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H2.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43551 F53H2.1, isoform a 109.6 934 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048189
WBRNAi00015546
WBRNAi00032719
WBRNAi00070114

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53H2.1a 20387715 20387780 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010004 F53H2.1 F53H2.1 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53H2.1a 20387715 20387780 1
CDS:F53H2.1a 20387823 20387906 1
CDS:F53H2.1a 20388013 20388141 1
CDS:F53H2.1a 20388272 20388388 1
CDS:F53H2.1a 20388475 20388534 1
CDS:F53H2.1a 20389461 20389693 1
CDS:F53H2.1a 20389736 20389889 1
CDS:F53H2.1a 20389940 20390055 1
CDS:F53H2.1a 20390098 20390134 1
CDS:F53H2.1a 20390180 20390241 1
CDS:F53H2.1a 20390433 20390517 1
CDS:F53H2.1a 20390563 20390712 1
CDS:F53H2.1a 20390762 20390826 1
CDS:F53H2.1a 20390903 20390984 1
CDS:F53H2.1a 20391033 20391112 1
CDS:F53H2.1a 20391253 20391369 1
CDS:F53H2.1a 20391455 20391744 1
CDS:F53H2.1a 20391793 20391872 1
CDS:F53H2.1a 20391927 20392237 1
CDS:F53H2.1a 20392287 20392395 1
CDS:F53H2.1a 20392934 20393056 1
CDS:F53H2.1a 20393113 20393367 1

1 Sequence

Length
2805

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53H2.1a.1 F53H2.1a.1 2805   V: 20387715-20393367