WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48F5.6d.1 Sequence Name  F48F5.6d.1
Length (nt)  198   Chromosome Location  V: 20452930-20453184
Chromosome . Primary Identifier  V Chromosome Location . Start  20452930
Chromosome Location . End  20453184 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48F5.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009848 F48F5.6 F48F5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48F5.6d F48F5.6d 198   V: 20452930-20453073

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48F5.6d.1 20452930 20453184 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219549   144   V: 20452930-20453073 Caenorhabditis elegans
Exon219551   54   V: 20453131-20453184 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48F5.6d.1 20452930 20453184 -1

1 Sequence

Length
198

1 Sequence Ontology Term

Identifier Name Description
transcript