WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0250.2.1 Sequence Name  B0250.2.1
Length (nt)  842   Chromosome Location  V: 20476747-20479089
Chromosome . Primary Identifier  V Chromosome Location . Start  20476747
Chromosome Location . End  20479089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0250.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007119 calf-1 B0250.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0250.2 B0250.2 534   V: 20476885-20477023

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0250.2.1 20476747 20479089 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219614   277   V: 20476747-20477023 Caenorhabditis elegans
Exon219615   75   V: 20477303-20477377 Caenorhabditis elegans
Exon219616   97   V: 20477430-20477526 Caenorhabditis elegans
Exon219617   121   V: 20478650-20478770 Caenorhabditis elegans
Exon219618   272   V: 20478818-20479089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0250.2.1 20476747 20479089 -1

1 Sequence

Length
842

1 Sequence Ontology Term

Identifier Name Description
transcript